CODE 61198 ACADEMIC YEAR 2024/2025 CREDITS 3 cfu anno 2 MEDICINA E CHIRURGIA 8745 (LM-41) - GENOVA SCIENTIFIC DISCIPLINARY SECTOR MED/07 LANGUAGE Italian TEACHING LOCATION GENOVA SEMESTER 2° Semester MODULES Questo insegnamento è un modulo di: ETIOLOGY AND PATHOGENESIS OF DISEASES TEACHING MATERIALS AULAWEB OVERVIEW Microbiology is a science that studies microorganisms, microscopic organisms having an extraordinary impact on the entire life and the composition of our planet. Microorganisms and humans have a very close relationship.Some thousands of microbial species, collectively known as microbiota, live in our body and plays useful functions, instead other species, pathogens, may cause morbidity.The students should know the biology of the microorganisms and their strategies to cause diseases in humans. AIMS AND CONTENT AIMS AND LEARNING OUTCOMES General Microbiology: to know the main characteristics of prokaryotes, eukaryotes and viruses and their classification. The host-microbe interactions (symbiosis, parasitism, opportunism, colonization, infection, disease). General Bacteriology: to know the characteristics of bacteria (bacterial structure, growth and microbial metabolism, overview of bacterial genetics). To understand the bacterial pathogenicity and virulence factors (input, adherence to host tissue, invasion, permanence, exotoxins and endotoxins, hydrolytic enzymes, antiphagocytic mechanisms), intracellular parasites and antigen features. Systematic Bacteriology: Virulence factors and mechanisms of pathogenicity of the following microorganisms: Clostridium spp. Streptococcus spp., Staphylococcus spp., Mycobacterium spp., Enterobacterales, non-fermenting Gram-negatives, V. cholerae, Neisseria spp., Mycoplasma spp., Moraxella spp., Haemophilus spp., Legionella spp., Chlamydia spp., Rickettsia spp. L. monocytogenes, H. pylori. To know the major classes of chemotherapeutic agents and antibiotics (beta-lactams, fosfomycin, glycopeptides, aminoglycosides, tetracyclines, quinolones, chloramphenicol, macrolides, clindamycin, oxazolidinones, streptogramins, nitroimidazoles, rifampin) and their main characteristics (spectrum of action, target, mechanisms of drug resistance). Susceptibility, antimicrobial resistance and in vitro antibiotic susceptibility testing. General Virology: to know the general structural characteristics and the different families of animal viruses and their classification. To know viral replication in general and the different replicative classes, hints at viral genetics). To understand the different mechanisms of viral pathogenicity, direct and immune-mediated, and the stages of pathogenesis of viral infections Systematic Virology: to know the structural and replicative characteristics and mechanisms of pathogenicity of the main human viruses: herpesvirus, primary hepatitis viruses (A, B, C, E), HIV, HPV, Orthomyxovirus, Paramyxovirus Mycology and parasitology: to know the general characteristics of mycetes, protozoa and helminths At the end of the course the student will be able: to gain a deep knowledge about the different pathogenic microorganisms and their relationship with the host; to comprehend pathogenic mechanisms and virulence factors of bacteria; to know the main classes of chemotherapy agents and antibiotics; to comprehend pathogenic mechanisms of viruses and to know the main antiviral drugs; to know the main features of mycetes, protozoa and helminths TEACHING METHODS The teaching methods include: lectures (30 total hours) Any Student with documented Specific Learning Disorders (SLD), or with any special needs, shall reach out to the Lecturer(s) and to the dedicated SLD Representative in the Department before class begins, in order to liase and arrange the specific teaching methods and ensure proper achievement of the learning aims and outcomes. SYLLABUS/CONTENT Introduction to Medical Microbiology General Bacteriology Bacterial cell structure Genetic material exchange, biofilm Bacterial metabolism Spore Host-microorganism interactions, microbiota Mechanisms of virulence and direct and indirect bacterial pathogenicity Toxins Antibiotics (generalities, mechanisms of action and resistance of the main groups) Systematica bacteriology Clostridia Mycobacteria Streptococci Staphylococci Enterobacteria Gram-negative non-fermenting bacteria Neisseria Haemophils Moraxelle Chlamydiae Rickettsie Listeria monocytogenes Legionellae Mycoplasmas H. pylori Microbial and viral ecology General virology Structure of animal viruses Viral replication Viral replicative classes Viral pathogenicity Systematic virology Orthomyxovirus (influenza virus) Paramyxovirus Primary hepatitis viruses (A, E, B, C) HIV HPV Herpesvirus General mycology Fungal cell structure Antifungal drugs (generalities, mechanisms of action and resistance) Microbiological diagnostics (direct, indirect, antibiogram, MIC) Hints on vaccines RECOMMENDED READING/BIBLIOGRAPHY Antonelli et al. Principi di Microbiologia Medica II ed. CEA 2022 La Placa Microbiologia Medica. Edises 2014 Murray et al. Microbiologia Medica EMSI TEACHERS AND EXAM BOARD VINCENZO DI PILATO Ricevimento: Mail contact: vincenzo@dipilato@unige.it GABRIELLA PIATTI Exam Board WILLIAM BRUNO (President) VINCENZO DI PILATO (President) CINZIA MARIA DOMENICOTTI (President) GUIDO FERLAZZO (President) PAOLA GHIORZO (President) GABRIELLA PIETRA (President) ALDAMARIA PULITI (President) SONIA SCARFI' (President) ANNA MARCHESE GABRIELLA PIATTI CLAUDIA CANTONI (President and Coordinator of Integrated Course) LESSONS LESSONS START Second semester (March 2025) Class schedule The timetable for this course is available here: Portale EasyAcademy EXAMS EXAM DESCRIPTION The oral examination is in conjunction with the General Pathology exam. The student should demonstrate the ability to critically discuss all the questions concerning the microbiology course. At the end of the course, in the first week of June, approximately, a pre-exam for the Microbiology Module will be scheduled, and both students of the current AY and students of the previous years will have access to. Students are allowed to attend it even without the evaluation of Etiology and Pathogenesis of Diseases 1. This opportunity is available only for this pre-exam: for the ordinary sessions, students must have passed the Etiology and Pathogenesis of Diseases 1 exam. The Microbiology mark obtained in the pre-exam will be valid for the next exam sessions planned in June, July, and September of the same AY. If the General Pathology Module is not passed, the Microbiology mark obtained in the pre-exam will still be valid until the mark expiry date. Students who do not pass the Microbiology pre-exam will have the opportunity to take the exam, in the usual manner, according to the programmed schedule. A minimum mark of 18/30 is required to pass the module. The mark 30/30 with honors will correspond to an excellent knowledge of all arguments. ASSESSMENT METHODS The evaluation is carried out through an exam which seeks to ascertain the actual acquisition of the expected learning resultsby the student. To demonstrate their knowledge, the students should prove to know: the main characteristics of prokaryotes, eukaryotes and viruses and their classification. the host-microbe interactions (symbiosis, parasitism, opportunism, colonization, infection, disease); the characteristics of bacteria (bacterial structure, growth and microbial metabolism, overview of bacterial genetics); the bacterial pathogenicity and virulence factors (entry, adherence to host tissue, invasion, permanence, exotoxins and endotoxins, hydrolytic enzymes, antiphagocytic mechanisms), intracellular parasites and antigenic features; the major classes of chemotherapeutic agents and antibiotics (beta-lactams, glycopeptides, fosfomycin aminoglycosides, tetracyclines, quinolones, chloramphenicol, macrolides, clindamycin, oxazolidinones, streptogramins, nitroimidazoles, rifampin) and their main characteristics (spectrum of action, target, mechanisms of drug resistance); susceptibility and antimicrobial resistance and quantitative and qualitative determination of antibiotic activity; the virulence factors and pathogenicity mechanisms of the main pathogenic species for humans: Clostridium spp. Streptococcus spp., Staphylococcus spp, Mycobacterium spp. Enterobacterales, non-fermenting Gram-negatives, Neisseria spp., Mycoplasma spp., Moraxella spp., Haemophilus spp., Legionella spp., Chlamydia spp., Rickettsia spp. L. monocytogenes, H. pylori, V. cholerae the general characteristics of the viruses (structure and composition, viral classification, viral replication, viral genetics overview); the mechanisms of pathogenesis of viral infections (transmission and penetration of the virus in the host, dissemination, tropism, virulence and cytopathogenicity, persistence, latency, reactivation) the mechanisms of pathogenicity of the main human viruses: herpesvirus, hepatitis viruses (A, B, C, E), HIV, HPV, Orthomyxovirus, Paramyxovirus the general characteristics of mycetes, protozoa and helminths. Exam schedule Data appello Orario Luogo Degree type Note 09/01/2025 08:30 GENOVA Orale 04/02/2025 08:30 GENOVA Orale 20/02/2025 08:30 GENOVA Orale 17/04/2025 08:30 GENOVA Orale 18/06/2025 08:30 GENOVA Orale 08/07/2025 08:30 GENOVA Orale 23/07/2025 08:30 GENOVA Orale 18/09/2025 08:30 GENOVA Orale